Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904143.1_cds_XP_016454293.1_48334
CDS Infomation

[gene=LOC107778530] [db_xref=GeneID:107778530] [protein=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase-like] [protein_id=XP_016454293.1] [location=complement(join(50599..50617,51052..51197,51372..51547,51900..52016,53622..55467))] [gbkey=CDS]
Sequence

ATGCCGTTCACCCTTTTATCTCTTCCACCTTTCCCTTCACTTCTCCACCATACCCCACCA
CCACTCCAATTCAAACCCTTCACTTCCCTCCACCATCTCCGCCTCAAGTACCCCACCACC
GTCTCCGCCATTGGCGCCGACGGAAAATACTACCCCAACCCTTCAGATGATGATCCACCT
GAAGCACCAGAAGATTCAATGCATGGTGTTAACAAATTCCAGCAAATTCAACGCCAAGCA
GCTAAAGCAAAAAAGCAACAAGAAGAGCTTTTTATAAAAGAACAGTCCATTTTTGTAAAT
GCATTAGCTGACGTGGAAGATGCACCAGATAATCCTTTAATTAATGATAATGACAATTCT
GGGGATGATTTATTTGGTGAAATTGATAAAGCTATTGCCTTGAAAAGAAAAGAGTTTGTT
AAACAAGGCCTGTTAAAGCCTAACCCTCCCAAGAACTCAACTTTAGTTGAATCTGAAGTT
GAAAATGTTGATGAATTAGAGCCTGAAGAAGTTGTTGATTTAGAGGAGATTGATGGGCTC
AGTGGTTTGGCTGAAATTGATGAAAGCGATGAAGAAAAATCAGATTTTGAGGTAAGTGAT
GATATGGGTAAGAGTGAGTTTTCTGATTTATCTTCGTTTGATATTGATTTTGATGAGTTT
GGTAAAACTAAGCCAAGAATTGTGGAACCTAAGTTTAGGATGAGCTTAGCTGAGCTTTTA
GACGAGAGTAGGGTAGTGCCACTGTCTGTGTATGGAGATATAGAGGTTGGGATTAGTGGT
GTACAACATGATTCACGGTTGGTTGAGAGTGGTGATTTGTTTGTGTGTTGTGTTGGGAGG
AAAACTGATGGACATTTATATTTCTCCGAGGCTGATAAGAGAGGGGCTGTTGCTGTTGTA
GCTAGTAAAGAGATTGATATTGAGGAAACTTTGGGGTGTAAAGCATTGGTTATTGTGGAG
GACACGAATGCAGTGCTTGCAGTGTTAGCTGCTTCATTTTATAGGCATCCGTCTAAGAGT
ATGTCTTTGATTGGGATTACAGGAACTAATGGAAAGACTACAACATCTTACTTAATAAAG
GCGATGTATGAAGCAATGGGGTTAAGGACGGGCATGTTGAGTACAGTAGGGTATTATATT
TATGGGGATAACAAGTTGGAGTCTCCTCATACGACCCCCGATGCAGTTTTGGTTCAGAAA
CTGATGGCGAAGATGGTTCATAACGGGACTGAGGCTTTGGTAATGGAGGCTTCTTCTCAT
GGATTGGCATTAGGTCGGTGTGATGAGGTTGATTTTGACATTGCAGTTTTTACAAACTTG
ACGCGGGATCATTTGGATTTTCATGGGACTGAGGAGGAGTATAGGGATGCTAAAGCTAAG
CTGTTTGCTAGGATGGTGGACCCTGCACGACACCGCAAGATTGTGAATATTGATGACCCT
AATGCAGCTTTCTTTTTAGCTCAAGGAAACCCAGATGTGCCTATTGTGACTTTTGCAATG
GAGAATAAGAGTGCTGATGTTCATCCCTTAAAGTTTCAATTATCTCTCTTTGAGACTCAA
GTATTGGTCAACACACCTCAAGGCATTTTGGAAATATCTTCTGGCTTGCTTGGAAGGCAT
AATATCTATAACATTCTTGCAGCAGTCGCCGTTGGAATTGCGGTTGGGGCACCTTTGGAG
GACATTGTCAAAGGTATTGAAGAGGTTGATGCAGTCCCTGGTCGATGTGAATTGATAGAT
GAGGAACAGGCTTTCGGAGTAATTGTAGACTATGCTCATACCCCTGATGCTTTATCTAGA
CTTCTTGATTATGTGAGAGAGCTTGGTCCTAGGAGGGTTATAACTGTTTTTGGTTGTGCT
GGAGAGGGCGACAGAGGGAAGAGGCCCATAATGGCAAAGATTGCGACAGATAAAAGTGAT
GTGACGATTCTGACATCTGACAATCCAAAGACTGAGGATCCTTTGGACATCTTGGATGAT
ATGTTGGCTGGTGTGGGATGGACAATGCAGGACTACTTGAAACACGGAGAGAATGATTAT
TATCCTCCTCTCCCCAATGGCCATAGACTCTTCCTACATGATATCAGACGTGTGGCTGTG
CGCTGTGCCGTTGCCATGGGTGAGGAAGGTGATATAGTTGTGGTTGCTGGCAAAGGCCAT
GAAACATACCAAATAGAAGGTGACAAGAAGGAATTTTTTGATGACCGAGAGGAATGTAGA
GAAGCTTTACAGTACATTGATGAACTTCACCAAGCTGGAATTGACACAAGTGAATTTCCA
TGGCGGTTACCAGAGAGTCATTGA

Peptide Sequence

PEP ID

XP_016454293.1
PEP Infomation

PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase-like [Nicotiana tabacum]
Sequence

MPFTLLSLPPFPSLLHHTPPPLQFKPFTSLHHLRLKYPTTVSAIGADGKYYPNPSDDDPP
EAPEDSMHGVNKFQQIQRQAAKAKKQQEELFIKEQSIFVNALADVEDAPDNPLINDNDNS
GDDLFGEIDKAIALKRKEFVKQGLLKPNPPKNSTLVESEVENVDELEPEEVVDLEEIDGL
SGLAEIDESDEEKSDFEVSDDMGKSEFSDLSSFDIDFDEFGKTKPRIVEPKFRMSLAELL
DESRVVPLSVYGDIEVGISGVQHDSRLVESGDLFVCCVGRKTDGHLYFSEADKRGAVAVV
ASKEIDIEETLGCKALVIVEDTNAVLAVLAASFYRHPSKSMSLIGITGTNGKTTTSYLIK
AMYEAMGLRTGMLSTVGYYIYGDNKLESPHTTPDAVLVQKLMAKMVHNGTEALVMEASSH
GLALGRCDEVDFDIAVFTNLTRDHLDFHGTEEEYRDAKAKLFARMVDPARHRKIVNIDDP
NAAFFLAQGNPDVPIVTFAMENKSADVHPLKFQLSLFETQVLVNTPQGILEISSGLLGRH
NIYNILAAVAVGIAVGAPLEDIVKGIEEVDAVPGRCELIDEEQAFGVIVDYAHTPDALSR
LLDYVRELGPRRVITVFGCAGEGDRGKRPIMAKIATDKSDVTILTSDNPKTEDPLDILDD
MLAGVGWTMQDYLKHGENDYYPPLPNGHRLFLHDIRRVAVRCAVAMGEEGDIVVVAGKGH
ETYQIEGDKKEFFDDREECREALQYIDELHQAGIDTSEFPWRLPESH

Transcript Sequence

Gene sequence data has not been registered.